Package: glinvci
Type: Package
Title: Phylogenetic Comparative Methods with Uncertainty Estimates
Version: 1.2.4
Date: 2024-04-16
Authors@R: c(person(family="Kiang", given="Woodrow", role=c("cre","aut"), email="hello@hckiang.com"))
Maintainer: Woodrow Kiang <hello@hckiang.com>
Description: A framework for analytically computing the asymptotic
        confidence intervals and maximum-likelihood estimates of a
        class of continuous-time Gaussian branching processes defined
        by Mitov V, Bartoszek K, Asimomitis G, Stadler T (2019)
        <doi:10.1016/j.tpb.2019.11.005>. The class of model includes
        the widely used Ornstein-Uhlenbeck and Brownian motion
        branching processes. The framework is designed to be flexible
        enough so that the users can easily specify their own
        sub-models, or re-parameterizations, and obtain the
        maximum-likelihood estimates and confidence intervals of their
        own custom models.
License: GPL-3
RoxygenNote: 7.2.2
VignetteBuilder: utils
Encoding: UTF-8
URL: https://git.sr.ht/~hckiang/glinvci,
        https://github.com/hckiang/glinvci
Depends: R (>= 3.3.0)
Imports: optimx, lbfgsb3c, BB, ape, numDeriv, plyr, rlang, generics,
        utils, stats
Suggests: testthat
Config/pak/sysreqs: cmake
Repository: https://hckiang.r-universe.dev
Date/Publication: 2024-04-16 22:15:52 UTC
RemoteUrl: https://github.com/hckiang/glinvci
RemoteRef: HEAD
RemoteSha: c8b06a1778e5367702616593723efd7fdacbc448
NeedsCompilation: yes
Packaged: 2026-07-05 09:30:18 UTC; root
Author: Woodrow Kiang [cre, aut]